Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Mir1895-201ENSMUST00000122615 79 ntBASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm27494-201ENSMUST00000184735 189 ntBASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm2272-201ENSMUST00000194903 582 ntBASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Chchd1-203ENSMUST00000224633 557 ntBASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdk5rap1Q8BTW8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm45612-201ENSMUST00000211320 160 ntBASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdk5rap1Q8BTW8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdk5rap1Q8BTW8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm11025-201ENSMUST00000140773 466 ntBASIC14.4□□□□□ -0.1
Cdk5rap1Q8BTW8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms