Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ckap4Q8BMK4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ckap4Q8BMK4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Gm12134-201ENSMUST00000122109 520 ntBASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Gm17807-201ENSMUST00000186869 298 ntBASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ckap4Q8BMK4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ckap4Q8BMK4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ckap4Q8BMK4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms