Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.32■□□□□ 0.2
Nop53Q8BK35 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.32■□□□□ 0.2
Nop53Q8BK35 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.32■□□□□ 0.2
Nop53Q8BK35 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Birc2-201ENSMUST00000054878 378 ntBASIC16.32■□□□□ 0.2
Nop53Q8BK35 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nop53Q8BK35 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.31■□□□□ 0.2
Nop53Q8BK35 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.31■□□□□ 0.2
Nop53Q8BK35 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.31■□□□□ 0.2
Nop53Q8BK35 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nop53Q8BK35 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Gm24589-201ENSMUST00000116692 94 ntBASIC16.3■□□□□ 0.2
Nop53Q8BK35 Gm15372-201ENSMUST00000120729 834 ntBASIC16.3■□□□□ 0.2
Nop53Q8BK35 Gm12895-201ENSMUST00000122214 226 ntBASIC16.3■□□□□ 0.2
Nop53Q8BK35 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Gm19164-201ENSMUST00000210667 640 ntBASIC16.3■□□□□ 0.2
Nop53Q8BK35 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.3■□□□□ 0.2
Nop53Q8BK35 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nop53Q8BK35 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Gm25745-201ENSMUST00000174945 133 ntBASIC16.29■□□□□ 0.2
Nop53Q8BK35 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop53Q8BK35 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms