Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf38Q8BI21 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf38Q8BI21 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf38Q8BI21 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf38Q8BI21 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.71□□□□□ -0.06
Rnf38Q8BI21 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf38Q8BI21 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf38Q8BI21 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.71□□□□□ -0.06
Rnf38Q8BI21 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Gm14722-201ENSMUST00000118943 689 ntBASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Rprl3-201ENSMUST00000157400 290 ntBASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Gm27357-201ENSMUST00000183754 135 ntBASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Gm9172-201ENSMUST00000212092 954 ntBASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Rnf38Q8BI21 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rnf38Q8BI21 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Gm17807-201ENSMUST00000186869 298 ntBASIC14.68□□□□□ -0.06
Rnf38Q8BI21 Ank2-226ENSMUST00000189368 339 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms