Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim6Q8BGE7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim6Q8BGE7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Gm25406-201ENSMUST00000157599 105 ntBASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Gm44487-201ENSMUST00000205145 325 ntBASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim6Q8BGE7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Gm11950-201ENSMUST00000121615 838 ntBASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Gm45328-201ENSMUST00000210942 917 ntBASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim6Q8BGE7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim6Q8BGE7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms