Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Gm12350-201ENSMUST00000121208 462 ntBASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4bQ8BGE6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4bQ8BGE6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4bQ8BGE6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4bQ8BGE6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4bQ8BGE6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Atg4bQ8BGE6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.33□□□□□ -0.11
Atg4bQ8BGE6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Gm4899-201ENSMUST00000178708 719 ntBASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Gm7787-201ENSMUST00000216858 688 ntBASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Atg4bQ8BGE6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Gm27628-201ENSMUST00000184911 107 ntBASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.32□□□□□ -0.12
Atg4bQ8BGE6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.31□□□□□ -0.12
Atg4bQ8BGE6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms