Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim65Q8BFW4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Gm11764-201ENSMUST00000120221 623 ntBASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim65Q8BFW4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 AV026068-213ENSMUST00000223675 1171 ntBASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim65Q8BFW4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Gm45167-201ENSMUST00000208007 322 ntBASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim65Q8BFW4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms