Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vrk1Q80X41 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Vrk1Q80X41 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vrk1Q80X41 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vrk1Q80X41 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vrk1Q80X41 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vrk1Q80X41 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.51□□□□□ -0.09
Vrk1Q80X41 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Gm9385-201ENSMUST00000117563 472 ntBASIC14.51□□□□□ -0.09
Vrk1Q80X41 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Rpph1-201ENSMUST00000175096 319 ntBASIC14.51□□□□□ -0.09
Vrk1Q80X41 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Gm43474-201ENSMUST00000196415 774 ntBASIC14.51□□□□□ -0.09
Vrk1Q80X41 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vrk1Q80X41 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.51□□□□□ -0.09
Vrk1Q80X41 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Gm16198-201ENSMUST00000118766 670 ntBASIC14.5□□□□□ -0.09
Vrk1Q80X41 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.5□□□□□ -0.09
Vrk1Q80X41 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.5□□□□□ -0.09
Vrk1Q80X41 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Vrk1Q80X41 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.5□□□□□ -0.09
Vrk1Q80X41 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vrk1Q80X41 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms