Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Gm17968-201ENSMUST00000194902 784 ntBASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdh19Q80TF3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh19Q80TF3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Mir1895-201ENSMUST00000122615 79 ntBASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Gm11025-201ENSMUST00000140773 466 ntBASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh19Q80TF3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Gm27494-201ENSMUST00000184735 189 ntBASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh19Q80TF3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.88□□□□□ -0.03
Pcdh19Q80TF3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms