Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Rpap1Q80TE0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpap1Q80TE0 Gm6756-201ENSMUST00000180647 1620 ntBASIC23.36■■□□□ 1.33
Rpap1Q80TE0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rpap1Q80TE0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Mir1897-201ENSMUST00000122581 272 ntBASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpap1Q80TE0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rpap1Q80TE0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Dupd1-202ENSMUST00000224735 548 ntBASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rpap1Q80TE0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Gm28631-201ENSMUST00000190740 334 ntBASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Gm45195-201ENSMUST00000205597 1008 ntBASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rpap1Q80TE0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm15653-201ENSMUST00000119247 907 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm29310-201ENSMUST00000185468 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21825-201ENSMUST00000185728 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm29109-201ENSMUST00000185895 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21896-201ENSMUST00000186520 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21873-201ENSMUST00000186728 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21794-201ENSMUST00000187056 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21880-201ENSMUST00000187275 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21826-201ENSMUST00000187451 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21198-201ENSMUST00000188393 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21749-201ENSMUST00000189343 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21901-201ENSMUST00000189568 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm29424-201ENSMUST00000189716 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm28599-201ENSMUST00000189838 694 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21867-201ENSMUST00000189917 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm29269-201ENSMUST00000190087 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21722-201ENSMUST00000190153 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm28423-201ENSMUST00000190701 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21899-201ENSMUST00000190745 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21910-201ENSMUST00000191163 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21849-201ENSMUST00000191571 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm28678-201ENSMUST00000191593 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm20910-201ENSMUST00000193268 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm21871-201ENSMUST00000194621 696 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm42612-201ENSMUST00000197986 623 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm43170-201ENSMUST00000199827 612 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Gm46209-201ENSMUST00000217912 553 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Mxra8os-201ENSMUST00000097740 687 ntBASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Rpap1Q80TE0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms