Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.62■□□□□ 0.25
Ush1gQ80T11 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ush1gQ80T11 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ush1gQ80T11 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ush1gQ80T11 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.6■□□□□ 0.25
Ush1gQ80T11 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Gm20949-201ENSMUST00000206478 952 ntBASIC16.6■□□□□ 0.25
Ush1gQ80T11 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ush1gQ80T11 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.59■□□□□ 0.25
Ush1gQ80T11 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Gm14722-201ENSMUST00000118943 689 ntBASIC16.59■□□□□ 0.25
Ush1gQ80T11 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Gm18889-201ENSMUST00000174284 929 ntBASIC16.59■□□□□ 0.25
Ush1gQ80T11 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.59■□□□□ 0.25
Ush1gQ80T11 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.59■□□□□ 0.25
Ush1gQ80T11 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.59■□□□□ 0.25
Ush1gQ80T11 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.59■□□□□ 0.25
Ush1gQ80T11 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Ush1gQ80T11 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ush1gQ80T11 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.58■□□□□ 0.24
Ush1gQ80T11 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gm25948-201ENSMUST00000175334 112 ntBASIC16.58■□□□□ 0.24
Ush1gQ80T11 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gm43474-201ENSMUST00000196415 774 ntBASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gm18246-201ENSMUST00000221023 728 ntBASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.58■□□□□ 0.24
Ush1gQ80T11 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.58■□□□□ 0.24
Ush1gQ80T11 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ush1gQ80T11 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.58■□□□□ 0.24
Ush1gQ80T11 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms