Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ShprhQ7TPQ3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Gm45668-201ENSMUST00000211271 493 ntBASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Mir125a-201ENSMUST00000083545 68 ntBASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Gm7390-201ENSMUST00000212452 1216 ntBASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ShprhQ7TPQ3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ShprhQ7TPQ3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Gm6944-201ENSMUST00000182449 1006 ntBASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Gm6745-201ENSMUST00000199216 526 ntBASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Gm43195-201ENSMUST00000200614 2332 ntBASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 BC001981-202ENSMUST00000191393 1545 ntBASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ShprhQ7TPQ3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Gm18624-201ENSMUST00000220966 658 ntBASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ShprhQ7TPQ3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
ShprhQ7TPQ3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
ShprhQ7TPQ3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShprhQ7TPQ3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms