Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.8□□□□□ -0.36
Smim12Q78RX3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Gm15372-201ENSMUST00000120729 834 ntBASIC12.8□□□□□ -0.36
Smim12Q78RX3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Gm8318-201ENSMUST00000182954 872 ntBASIC12.8□□□□□ -0.36
Smim12Q78RX3 Gm27742-201ENSMUST00000184667 60 ntBASIC12.8□□□□□ -0.36
Smim12Q78RX3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.8□□□□□ -0.36
Smim12Q78RX3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Smim12Q78RX3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim12Q78RX3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.79□□□□□ -0.36
Smim12Q78RX3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Gm4459-201ENSMUST00000118750 468 ntBASIC12.79□□□□□ -0.36
Smim12Q78RX3 Gm15358-201ENSMUST00000119249 520 ntBASIC12.79□□□□□ -0.36
Smim12Q78RX3 AA414768-201ENSMUST00000121924 1257 ntBASIC12.79□□□□□ -0.36
Smim12Q78RX3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Celf4-206ENSMUST00000224553 1729 ntBASIC12.79□□□□□ -0.36
Smim12Q78RX3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim12Q78RX3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.78□□□□□ -0.36
Smim12Q78RX3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Gm25745-201ENSMUST00000174945 133 ntBASIC12.78□□□□□ -0.36
Smim12Q78RX3 Gm23634-201ENSMUST00000175071 91 ntBASIC12.78□□□□□ -0.36
Smim12Q78RX3 Gm8655-201ENSMUST00000221159 852 ntBASIC12.78□□□□□ -0.36
Smim12Q78RX3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.78□□□□□ -0.36
Smim12Q78RX3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim12Q78RX3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim12Q78RX3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim12Q78RX3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Smim12Q78RX3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms