Protein–RNA interactions for Protein: Q6ZPY7

Kdm3b, Lysine-specific demethylase 3B, mousemouse

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3bQ6ZPY7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Gm5566-201ENSMUST00000116118 459 ntBASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Gm43433-201ENSMUST00000196573 481 ntBASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 AC135669.1-201ENSMUST00000213585 412 ntBASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm3bQ6ZPY7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Gm43195-201ENSMUST00000200614 2332 ntBASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Gm43703-201ENSMUST00000200523 763 ntBASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm3bQ6ZPY7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Kdm3bQ6ZPY7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Kdm3bQ6ZPY7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Kdm3bQ6ZPY7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Kdm3bQ6ZPY7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Kdm3bQ6ZPY7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Gm37230-201ENSMUST00000194491 818 ntBASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Olfr286-202ENSMUST00000205305 969 ntBASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm3bQ6ZPY7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Gm27989-201ENSMUST00000184721 107 ntBASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Prob1-201ENSMUST00000097619 3021 ntBASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm3bQ6ZPY7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Gm18187-201ENSMUST00000196476 984 ntBASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm3bQ6ZPY7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms