Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx55Q6ZPL9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Gm24543-201ENSMUST00000103867 82 ntBASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Gm5566-201ENSMUST00000116118 459 ntBASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Gm9719-201ENSMUST00000162765 543 ntBASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx55Q6ZPL9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ddx55Q6ZPL9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ddx55Q6ZPL9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Ddx55Q6ZPL9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Gm14127-201ENSMUST00000117906 678 ntBASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx55Q6ZPL9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Shd-206ENSMUST00000225145 998 ntBASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx55Q6ZPL9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx55Q6ZPL9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms