Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Gm14822-201ENSMUST00000122247 291 ntBASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Gm25911-201ENSMUST00000157621 56 ntBASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.72■□□□□ 0.11
Rtl3Q6P1Y1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.71■□□□□ 0.11
Rtl3Q6P1Y1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rtl3Q6P1Y1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rtl3Q6P1Y1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rtl3Q6P1Y1 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.68■□□□□ 0.1
Rtl3Q6P1Y1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms