Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cpsf6Q6NVF9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cpsf6Q6NVF9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf6Q6NVF9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm11780-201ENSMUST00000136880 516 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm4535-201ENSMUST00000182274 558 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm6296-201ENSMUST00000222599 943 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm10355-201ENSMUST00000097146 517 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Cpsf6Q6NVF9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf6Q6NVF9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms