Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col11a2Q64739 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col11a2Q64739 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.14■□□□□ 0.5
Col11a2Q64739 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col11a2Q64739 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Col11a2Q64739 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.14■□□□□ 0.49
Col11a2Q64739 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col11a2Q64739 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.14■□□□□ 0.49
Col11a2Q64739 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.13■□□□□ 0.49
Col11a2Q64739 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.13■□□□□ 0.49
Col11a2Q64739 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Gm12341-201ENSMUST00000119724 503 ntBASIC18.13■□□□□ 0.49
Col11a2Q64739 Gm15806-201ENSMUST00000120696 955 ntBASIC18.13■□□□□ 0.49
Col11a2Q64739 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.13■□□□□ 0.49
Col11a2Q64739 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.13■□□□□ 0.49
Col11a2Q64739 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Gm7067-201ENSMUST00000207698 1249 ntBASIC18.13■□□□□ 0.49
Col11a2Q64739 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.13■□□□□ 0.49
Col11a2Q64739 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Gm5356-201ENSMUST00000093326 615 ntBASIC18.13■□□□□ 0.49
Col11a2Q64739 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col11a2Q64739 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.13■□□□□ 0.49
Col11a2Q64739 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col11a2Q64739 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.13■□□□□ 0.49
Col11a2Q64739 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Gm19220-201ENSMUST00000222682 803 ntBASIC18.12■□□□□ 0.49
Col11a2Q64739 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.12■□□□□ 0.49
Col11a2Q64739 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.12■□□□□ 0.49
Col11a2Q64739 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.12■□□□□ 0.49
Col11a2Q64739 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.12■□□□□ 0.49
Col11a2Q64739 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Col11a2Q64739 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col11a2Q64739 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col11a2Q64739 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col11a2Q64739 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Col11a2Q64739 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col11a2Q64739 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col11a2Q64739 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col11a2Q64739 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col11a2Q64739 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col11a2Q64739 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.11■□□□□ 0.49
Col11a2Q64739 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Col11a2Q64739 BC001981-202ENSMUST00000191393 1545 ntBASIC18.11■□□□□ 0.49
Col11a2Q64739 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col11a2Q64739 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col11a2Q64739 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms