Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn1Q62261 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.04□□□□□ -0.32
Sptbn1Q62261 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.04□□□□□ -0.32
Sptbn1Q62261 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn1Q62261 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm19164-201ENSMUST00000210667 640 ntBASIC13.03□□□□□ -0.32
Sptbn1Q62261 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.03□□□□□ -0.32
Sptbn1Q62261 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm18737-201ENSMUST00000173594 937 ntBASIC13.03□□□□□ -0.32
Sptbn1Q62261 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.03□□□□□ -0.32
Sptbn1Q62261 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.03□□□□□ -0.32
Sptbn1Q62261 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn1Q62261 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.02□□□□□ -0.32
Sptbn1Q62261 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.02□□□□□ -0.32
Sptbn1Q62261 Gm10154-201ENSMUST00000084445 354 ntBASIC13.02□□□□□ -0.32
Sptbn1Q62261 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Sptbn1Q62261 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Syt7-205ENSMUST00000224135 1557 ntBASIC13.02□□□□□ -0.33
Sptbn1Q62261 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Sptbn1Q62261 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sptbn1Q62261 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn1Q62261 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn1Q62261 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn1Q62261 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sptbn1Q62261 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms