Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.69■□□□□ 0.42
Scn9aQ62205 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn9aQ62205 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn9aQ62205 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn9aQ62205 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn9aQ62205 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn9aQ62205 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scn9aQ62205 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.68■□□□□ 0.42
Scn9aQ62205 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Gm11918-201ENSMUST00000121660 179 ntBASIC17.68■□□□□ 0.42
Scn9aQ62205 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.68■□□□□ 0.42
Scn9aQ62205 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.68■□□□□ 0.42
Scn9aQ62205 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scn9aQ62205 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Scn9aQ62205 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scn9aQ62205 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Scn9aQ62205 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.68■□□□□ 0.42
Scn9aQ62205 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn9aQ62205 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scn9aQ62205 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.67■□□□□ 0.42
Scn9aQ62205 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.67■□□□□ 0.42
Scn9aQ62205 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn9aQ62205 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.66■□□□□ 0.42
Scn9aQ62205 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.66■□□□□ 0.42
Scn9aQ62205 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Scn9aQ62205 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.66■□□□□ 0.42
Scn9aQ62205 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.66■□□□□ 0.42
Scn9aQ62205 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn9aQ62205 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn9aQ62205 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.65■□□□□ 0.42
Scn9aQ62205 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.65■□□□□ 0.42
Scn9aQ62205 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn9aQ62205 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.65■□□□□ 0.42
Scn9aQ62205 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Scn9aQ62205 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn9aQ62205 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn9aQ62205 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.65■□□□□ 0.42
Scn9aQ62205 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.65■□□□□ 0.42
Scn9aQ62205 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.65■□□□□ 0.42
Scn9aQ62205 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn9aQ62205 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn9aQ62205 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn9aQ62205 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn9aQ62205 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Scn9aQ62205 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.64■□□□□ 0.41
Scn9aQ62205 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.64■□□□□ 0.41
Scn9aQ62205 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.64■□□□□ 0.41
Scn9aQ62205 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.64■□□□□ 0.41
Scn9aQ62205 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Gm46209-201ENSMUST00000217912 553 ntBASIC17.64■□□□□ 0.41
Scn9aQ62205 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Scn9aQ62205 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn9aQ62205 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms