Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Gm10060-201ENSMUST00000212002 111 ntBASIC11.22□□□□□ -0.61
Foxc1Q61572 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Gm6296-201ENSMUST00000222599 943 ntBASIC11.22□□□□□ -0.61
Foxc1Q61572 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Foxc1Q61572 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.21□□□□□ -0.61
Foxc1Q61572 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Foxc1Q61572 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.21□□□□□ -0.61
Foxc1Q61572 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Foxc1Q61572 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.21□□□□□ -0.61
Foxc1Q61572 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.21□□□□□ -0.61
Foxc1Q61572 Gm15173-201ENSMUST00000122049 433 ntBASIC11.21□□□□□ -0.61
Foxc1Q61572 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.21□□□□□ -0.61
Foxc1Q61572 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.21□□□□□ -0.61
Foxc1Q61572 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Foxc1Q61572 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Foxc1Q61572 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Foxc1Q61572 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Foxc1Q61572 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Foxc1Q61572 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Foxc1Q61572 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Foxc1Q61572 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Foxc1Q61572 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Foxc1Q61572 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Foxc1Q61572 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm37935-201ENSMUST00000192012 982 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44357-201ENSMUST00000195897 142 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm19658-201ENSMUST00000196231 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44367-201ENSMUST00000196836 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44350-201ENSMUST00000197197 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44390-201ENSMUST00000197533 144 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44313-201ENSMUST00000198018 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44486-201ENSMUST00000198508 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44314-201ENSMUST00000199263 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44394-201ENSMUST00000199558 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44484-201ENSMUST00000199873 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44466-201ENSMUST00000200264 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm44359-201ENSMUST00000200671 138 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Foxc1Q61572 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.2□□□□□ -0.62
Foxc1Q61572 Gm18622-201ENSMUST00000219361 595 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms