Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox17Q61473 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox17Q61473 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox17Q61473 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sox17Q61473 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Sox17Q61473 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.29□□□□□ -0.12
Sox17Q61473 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox17Q61473 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.28□□□□□ -0.12
Sox17Q61473 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox17Q61473 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox17Q61473 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.28□□□□□ -0.12
Sox17Q61473 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sox17Q61473 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Sox17Q61473 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sox17Q61473 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox17Q61473 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox17Q61473 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox17Q61473 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.27□□□□□ -0.12
Sox17Q61473 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Sox17Q61473 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox17Q61473 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox17Q61473 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.27□□□□□ -0.13
Sox17Q61473 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.27□□□□□ -0.13
Sox17Q61473 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox17Q61473 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox17Q61473 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox17Q61473 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox17Q61473 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox17Q61473 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox17Q61473 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sox17Q61473 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.26□□□□□ -0.13
Sox17Q61473 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.26□□□□□ -0.13
Sox17Q61473 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sox17Q61473 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.26□□□□□ -0.13
Sox17Q61473 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox17Q61473 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox17Q61473 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.26□□□□□ -0.13
Sox17Q61473 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.26□□□□□ -0.13
Sox17Q61473 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Sox17Q61473 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sox17Q61473 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox17Q61473 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.26□□□□□ -0.13
Sox17Q61473 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sox17Q61473 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox17Q61473 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms