Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Gm15427-201ENSMUST00000117288 531 ntBASIC15.82■□□□□ 0.12
Smarcd1Q61466 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.82■□□□□ 0.12
Smarcd1Q61466 Gm6736-201ENSMUST00000166583 948 ntBASIC15.82■□□□□ 0.12
Smarcd1Q61466 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Smarcd1Q61466 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd1Q61466 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.81■□□□□ 0.12
Smarcd1Q61466 Gm16198-201ENSMUST00000118766 670 ntBASIC15.81■□□□□ 0.12
Smarcd1Q61466 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Gm5867-201ENSMUST00000063197 592 ntBASIC15.81■□□□□ 0.12
Smarcd1Q61466 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd1Q61466 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Celf4-206ENSMUST00000224553 1729 ntBASIC15.8■□□□□ 0.12
Smarcd1Q61466 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.8■□□□□ 0.12
Smarcd1Q61466 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.8■□□□□ 0.12
Smarcd1Q61466 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd1Q61466 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.79■□□□□ 0.12
Smarcd1Q61466 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.79■□□□□ 0.12
Smarcd1Q61466 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.79■□□□□ 0.12
Smarcd1Q61466 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.79■□□□□ 0.12
Smarcd1Q61466 Gm10154-201ENSMUST00000084445 354 ntBASIC15.79■□□□□ 0.12
Smarcd1Q61466 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd1Q61466 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms