Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.04□□□□□ -0.32
Clns1aQ61189 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.04□□□□□ -0.32
Clns1aQ61189 Gm7367-201ENSMUST00000057611 492 ntBASIC13.04□□□□□ -0.32
Clns1aQ61189 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clns1aQ61189 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clns1aQ61189 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Clns1aQ61189 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clns1aQ61189 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.03□□□□□ -0.32
Clns1aQ61189 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clns1aQ61189 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clns1aQ61189 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Clns1aQ61189 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clns1aQ61189 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clns1aQ61189 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clns1aQ61189 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clns1aQ61189 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.03□□□□□ -0.32
Clns1aQ61189 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clns1aQ61189 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clns1aQ61189 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clns1aQ61189 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Clns1aQ61189 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clns1aQ61189 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.02□□□□□ -0.32
Clns1aQ61189 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.02□□□□□ -0.32
Clns1aQ61189 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clns1aQ61189 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.02□□□□□ -0.32
Clns1aQ61189 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Clns1aQ61189 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clns1aQ61189 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clns1aQ61189 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Clns1aQ61189 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clns1aQ61189 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Clns1aQ61189 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.01□□□□□ -0.33
Clns1aQ61189 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms