Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Foxd3Q61060 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Foxd3Q61060 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.98□□□□□ -0.17
Foxd3Q61060 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Rprl3-201ENSMUST00000157400 290 ntBASIC13.98□□□□□ -0.17
Foxd3Q61060 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Foxd3Q61060 Gm44454-201ENSMUST00000198541 138 ntBASIC13.98□□□□□ -0.17
Foxd3Q61060 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.98□□□□□ -0.17
Foxd3Q61060 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.98□□□□□ -0.17
Foxd3Q61060 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.98□□□□□ -0.17
Foxd3Q61060 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.98□□□□□ -0.17
Foxd3Q61060 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
Foxd3Q61060 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Foxd3Q61060 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Foxd3Q61060 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Foxd3Q61060 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Foxd3Q61060 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Foxd3Q61060 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.97□□□□□ -0.17
Foxd3Q61060 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Foxd3Q61060 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.97□□□□□ -0.17
Foxd3Q61060 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Foxd3Q61060 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Foxd3Q61060 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxd3Q61060 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Foxd3Q61060 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.96□□□□□ -0.17
Foxd3Q61060 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.96□□□□□ -0.17
Foxd3Q61060 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxd3Q61060 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Foxd3Q61060 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.96□□□□□ -0.17
Foxd3Q61060 Gm43438-201ENSMUST00000198133 379 ntBASIC13.96□□□□□ -0.17
Foxd3Q61060 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.96□□□□□ -0.17
Foxd3Q61060 Gm15823-201ENSMUST00000064305 670 ntBASIC13.96□□□□□ -0.17
Foxd3Q61060 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.96□□□□□ -0.17
Foxd3Q61060 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.96□□□□□ -0.17
Foxd3Q61060 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxd3Q61060 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxd3Q61060 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Foxd3Q61060 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.96□□□□□ -0.18
Foxd3Q61060 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.96□□□□□ -0.18
Foxd3Q61060 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Foxd3Q61060 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd3Q61060 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Foxd3Q61060 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Foxd3Q61060 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Foxd3Q61060 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd3Q61060 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd3Q61060 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd3Q61060 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd3Q61060 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Foxd3Q61060 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms