Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.37□□□□□ -0.11
Ripk1Q60855 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.37□□□□□ -0.11
Ripk1Q60855 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ripk1Q60855 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Ripk1Q60855 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.36□□□□□ -0.11
Ripk1Q60855 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Gm27646-201ENSMUST00000183989 110 ntBASIC14.36□□□□□ -0.11
Ripk1Q60855 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.36□□□□□ -0.11
Ripk1Q60855 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.36□□□□□ -0.11
Ripk1Q60855 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.36□□□□□ -0.11
Ripk1Q60855 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ripk1Q60855 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ripk1Q60855 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Ripk1Q60855 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Gm24589-201ENSMUST00000116692 94 ntBASIC14.35□□□□□ -0.11
Ripk1Q60855 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.35□□□□□ -0.11
Ripk1Q60855 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.35□□□□□ -0.11
Ripk1Q60855 Gm6296-201ENSMUST00000222599 943 ntBASIC14.35□□□□□ -0.11
Ripk1Q60855 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ripk1Q60855 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.35□□□□□ -0.11
Ripk1Q60855 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.35□□□□□ -0.11
Ripk1Q60855 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ripk1Q60855 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ripk1Q60855 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ripk1Q60855 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ripk1Q60855 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ripk1Q60855 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Gm13418-201ENSMUST00000119097 944 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.34□□□□□ -0.11
Ripk1Q60855 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.34□□□□□ -0.11
Ripk1Q60855 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Ripk1Q60855 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Gm17971-201ENSMUST00000190239 806 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.34□□□□□ -0.11
Ripk1Q60855 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Grk6-207ENSMUST00000225925 2769 ntBASIC14.34□□□□□ -0.11
Ripk1Q60855 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms