Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.61□□□□□ -0.07
ClpbQ60649 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
ClpbQ60649 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.61□□□□□ -0.07
ClpbQ60649 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.61□□□□□ -0.07
ClpbQ60649 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ClpbQ60649 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.61□□□□□ -0.07
ClpbQ60649 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ClpbQ60649 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ClpbQ60649 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ClpbQ60649 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClpbQ60649 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.6□□□□□ -0.07
ClpbQ60649 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.6□□□□□ -0.07
ClpbQ60649 Gm1401-201ENSMUST00000122048 772 ntBASIC14.6□□□□□ -0.07
ClpbQ60649 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
ClpbQ60649 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.6□□□□□ -0.07
ClpbQ60649 Gm19164-201ENSMUST00000210667 640 ntBASIC14.6□□□□□ -0.07
ClpbQ60649 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
ClpbQ60649 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ClpbQ60649 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.6□□□□□ -0.07
ClpbQ60649 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClpbQ60649 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ClpbQ60649 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ClpbQ60649 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ClpbQ60649 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ClpbQ60649 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.59□□□□□ -0.07
ClpbQ60649 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Gm27646-201ENSMUST00000183989 110 ntBASIC14.59□□□□□ -0.07
ClpbQ60649 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.59□□□□□ -0.07
ClpbQ60649 AW822252-206ENSMUST00000208904 237 ntBASIC14.59□□□□□ -0.07
ClpbQ60649 Gm15590-201ENSMUST00000078419 552 ntBASIC14.59□□□□□ -0.07
ClpbQ60649 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.59□□□□□ -0.07
ClpbQ60649 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
ClpbQ60649 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.59□□□□□ -0.07
ClpbQ60649 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.59□□□□□ -0.07
ClpbQ60649 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClpbQ60649 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ClpbQ60649 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ClpbQ60649 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ClpbQ60649 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ClpbQ60649 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ClpbQ60649 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ClpbQ60649 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ClpbQ60649 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ClpbQ60649 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.58□□□□□ -0.08
ClpbQ60649 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.58□□□□□ -0.08
ClpbQ60649 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.58□□□□□ -0.08
ClpbQ60649 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms