Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Gm14722-201ENSMUST00000118943 689 ntBASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shroom1Q5SX79 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Auts2-212ENSMUST00000178555 309 ntBASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shroom1Q5SX79 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Gm14701-201ENSMUST00000117156 348 ntBASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Thap2-203ENSMUST00000218989 527 ntBASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Gm18246-201ENSMUST00000221023 728 ntBASIC16.16■□□□□ 0.18
Shroom1Q5SX79 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shroom1Q5SX79 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.15■□□□□ 0.18
Shroom1Q5SX79 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shroom1Q5SX79 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Shroom1Q5SX79 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.14■□□□□ 0.17
Shroom1Q5SX79 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms