Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Gm11780-201ENSMUST00000136880 516 ntBASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Gm4535-201ENSMUST00000182274 558 ntBASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Gm34391-201ENSMUST00000203706 907 ntBASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Gm6296-201ENSMUST00000222599 943 ntBASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Gm10355-201ENSMUST00000097146 517 ntBASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5d-4Q5R1F6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm27646-201ENSMUST00000183989 110 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44357-201ENSMUST00000195897 142 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm19658-201ENSMUST00000196231 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44367-201ENSMUST00000196836 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44350-201ENSMUST00000197197 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44390-201ENSMUST00000197533 144 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44313-201ENSMUST00000198018 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44486-201ENSMUST00000198508 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44314-201ENSMUST00000199263 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44394-201ENSMUST00000199558 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44484-201ENSMUST00000199873 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44466-201ENSMUST00000200264 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm44359-201ENSMUST00000200671 138 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Birc2-201ENSMUST00000054878 378 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Gm10819-201ENSMUST00000099988 561 ntBASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5d-4Q5R1F6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Gm13418-201ENSMUST00000119097 944 ntBASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav5d-4Q5R1F6 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms