Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm8097-201ENSMUST00000117903 829 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm7284-201ENSMUST00000131667 944 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm33142-201ENSMUST00000193913 867 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Celf4-206ENSMUST00000224553 1729 ntBASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-3Q5R1E6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Gm12895-201ENSMUST00000122214 226 ntBASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-3Q5R1E6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-3Q5R1E6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Grk6-207ENSMUST00000225925 2769 ntBASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms