Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scarf1Q5ND28 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scarf1Q5ND28 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Scarf1Q5ND28 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Scarf1Q5ND28 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scarf1Q5ND28 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Scarf1Q5ND28 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Gm12008-201ENSMUST00000117791 755 ntBASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.65■□□□□ 0.26
Scarf1Q5ND28 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Scarf1Q5ND28 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Mir3113-201ENSMUST00000175478 76 ntBASIC16.64■□□□□ 0.25
Scarf1Q5ND28 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scarf1Q5ND28 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scarf1Q5ND28 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Gm25911-201ENSMUST00000157621 56 ntBASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Mir8117-201ENSMUST00000184773 107 ntBASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.62■□□□□ 0.25
Scarf1Q5ND28 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scarf1Q5ND28 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms