Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Srrm1Q52KI8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Srrm1Q52KI8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Srrm1Q52KI8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Srrm1Q52KI8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Gm15483-201ENSMUST00000120338 456 ntBASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Gm7730-201ENSMUST00000212486 454 ntBASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srrm1Q52KI8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Srrm1Q52KI8 AC135669.1-201ENSMUST00000213585 412 ntBASIC17■□□□□ 0.31
Srrm1Q52KI8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17■□□□□ 0.31
Srrm1Q52KI8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srrm1Q52KI8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Gm15487-201ENSMUST00000122373 465 ntBASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Mir7684-201ENSMUST00000183858 60 ntBASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srrm1Q52KI8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Srrm1Q52KI8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms