Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gm6973-201ENSMUST00000117080 721 ntBASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gm15693-201ENSMUST00000120470 637 ntBASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gm10499-201ENSMUST00000174094 934 ntBASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Gm27306-201ENSMUST00000183970 107 ntBASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ddx49Q4FZF3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Gm6415-201ENSMUST00000118488 348 ntBASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Gm17837-201ENSMUST00000186435 985 ntBASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ddx49Q4FZF3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Gm13823-201ENSMUST00000119930 345 ntBASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Gm27989-201ENSMUST00000184721 107 ntBASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx49Q4FZF3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms