Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Prpf38aQ4FK66 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Gm16026-204ENSMUST00000162652 683 ntBASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Gm5312-201ENSMUST00000203728 547 ntBASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Gm18057-201ENSMUST00000208220 503 ntBASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prpf38aQ4FK66 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prpf38aQ4FK66 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Gm15920-201ENSMUST00000118998 402 ntBASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Gm43474-201ENSMUST00000196415 774 ntBASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.68■□□□□ 0.42
Prpf38aQ4FK66 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prpf38aQ4FK66 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms