Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shisa3Q3UPR0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gm27742-201ENSMUST00000184667 60 ntBASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shisa3Q3UPR0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Shisa3Q3UPR0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Shisa3Q3UPR0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Shisa3Q3UPR0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Gm23547-201ENSMUST00000158210 271 ntBASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Gm10819-201ENSMUST00000099988 561 ntBASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shisa3Q3UPR0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms