Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snx27Q3UHD6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Gm43767-201ENSMUST00000198933 381 ntBASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snx27Q3UHD6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Gm13616-201ENSMUST00000120600 222 ntBASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx27Q3UHD6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Gm15920-201ENSMUST00000118998 402 ntBASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.35■□□□□ 0.21
Snx27Q3UHD6 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snx27Q3UHD6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx27Q3UHD6 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms