Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Gm9229-201ENSMUST00000222777 126 ntBASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Gm9823-201ENSMUST00000051212 327 ntBASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Spg11Q3UHA3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Gm8463-201ENSMUST00000208573 613 ntBASIC13.88□□□□□ -0.19
Spg11Q3UHA3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Gm27514-201ENSMUST00000183692 110 ntBASIC13.88□□□□□ -0.19
Spg11Q3UHA3 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.88□□□□□ -0.19
Spg11Q3UHA3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Spg11Q3UHA3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm29310-201ENSMUST00000185468 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21825-201ENSMUST00000185728 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm29109-201ENSMUST00000185895 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21896-201ENSMUST00000186520 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21873-201ENSMUST00000186728 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21794-201ENSMUST00000187056 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21880-201ENSMUST00000187275 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21826-201ENSMUST00000187451 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21198-201ENSMUST00000188393 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21749-201ENSMUST00000189343 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21901-201ENSMUST00000189568 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm29424-201ENSMUST00000189716 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm28599-201ENSMUST00000189838 694 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21867-201ENSMUST00000189917 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm29269-201ENSMUST00000190087 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21722-201ENSMUST00000190153 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm28423-201ENSMUST00000190701 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21899-201ENSMUST00000190745 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21910-201ENSMUST00000191163 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21849-201ENSMUST00000191571 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm28678-201ENSMUST00000191593 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm20910-201ENSMUST00000193268 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm21871-201ENSMUST00000194621 696 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm6013-201ENSMUST00000212264 699 ntBASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Spg11Q3UHA3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms