Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm44390-201ENSMUST00000197533 144 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44313-201ENSMUST00000198018 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44486-201ENSMUST00000198508 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44314-201ENSMUST00000199263 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44394-201ENSMUST00000199558 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44484-201ENSMUST00000199873 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44466-201ENSMUST00000200264 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gm44359-201ENSMUST00000200671 138 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Birc2-201ENSMUST00000054878 378 ntBASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brf2Q3UAW9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Gm13418-201ENSMUST00000119097 944 ntBASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Gm27459-201ENSMUST00000184860 107 ntBASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Gm34391-201ENSMUST00000203706 907 ntBASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brf2Q3UAW9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brf2Q3UAW9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brf2Q3UAW9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.33□□□□□ -0.11
Brf2Q3UAW9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Brf2Q3UAW9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.33□□□□□ -0.11
Brf2Q3UAW9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Brf2Q3UAW9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Brf2Q3UAW9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.33□□□□□ -0.12
Brf2Q3UAW9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Brf2Q3UAW9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms