Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Mir8117-201ENSMUST00000184773 107 ntBASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Cdkl4Q3TZA2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdkl4Q3TZA2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Mir3113-201ENSMUST00000175478 76 ntBASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Gm2756-201ENSMUST00000195851 400 ntBASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdkl4Q3TZA2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.21■□□□□ 0.02
Cdkl4Q3TZA2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.21■□□□□ 0.02
Cdkl4Q3TZA2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Gm6736-201ENSMUST00000166583 948 ntBASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Gm27300-201ENSMUST00000184085 97 ntBASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Gm27335-201ENSMUST00000184758 97 ntBASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdkl4Q3TZA2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms