Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43aQ3TL54 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43aQ3TL54 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Gm27742-201ENSMUST00000184667 60 ntBASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.14■□□□□ 0.17
Trim43aQ3TL54 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Gm13312-201ENSMUST00000119631 718 ntBASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Gm17807-201ENSMUST00000186869 298 ntBASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim43aQ3TL54 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms