Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC21.29■■□□□ 1
Trpm1Q2TV84 Gm5356-201ENSMUST00000093326 615 ntBASIC21.29■■□□□ 1
Trpm1Q2TV84 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trpm1Q2TV84 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Mir1894-201ENSMUST00000122802 81 ntBASIC21.29■■□□□ 1
Trpm1Q2TV84 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trpm1Q2TV84 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC21.29■■□□□ 1
Trpm1Q2TV84 Gm45331-201ENSMUST00000209868 554 ntBASIC21.29■■□□□ 1
Trpm1Q2TV84 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC21.29■■□□□ 1
Trpm1Q2TV84 AC139580.1-202ENSMUST00000223574 928 ntBASIC21.29■■□□□ 1
Trpm1Q2TV84 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trpm1Q2TV84 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 Gm45751-201ENSMUST00000210185 1573 ntBASIC21.28■■□□□ 1
Trpm1Q2TV84 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC21.28■■□□□ 1
Trpm1Q2TV84 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
Trpm1Q2TV84 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trpm1Q2TV84 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC21.28■■□□□ 1
Trpm1Q2TV84 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC21.28■■□□□ 1
Trpm1Q2TV84 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 Gm5354-201ENSMUST00000182417 973 ntBASIC21.28■■□□□ 1
Trpm1Q2TV84 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC21.28■■□□□ 1
Trpm1Q2TV84 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Trpm1Q2TV84 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trpm1Q2TV84 AC131068.2-201ENSMUST00000226175 1453 ntBASIC21.28■■□□□ 1
Trpm1Q2TV84 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trpm1Q2TV84 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trpm1Q2TV84 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trpm1Q2TV84 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trpm1Q2TV84 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC21.27■■□□□ 1
Trpm1Q2TV84 Gm6944-201ENSMUST00000182449 1006 ntBASIC21.27■■□□□ 1
Trpm1Q2TV84 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC21.27■■□□□ 1
Trpm1Q2TV84 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trpm1Q2TV84 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Gm19430-201ENSMUST00000193847 2137 ntBASIC21.27■■□□□ 1
Trpm1Q2TV84 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trpm1Q2TV84 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trpm1Q2TV84 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Mir6392-201ENSMUST00000184924 108 ntBASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Gm7067-201ENSMUST00000207698 1249 ntBASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Gm13226-201ENSMUST00000117838 404 ntBASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Snora78-201ENSMUST00000158630 128 ntBASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trpm1Q2TV84 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm1Q2TV84 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm1Q2TV84 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm1Q2TV84 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm1Q2TV84 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm1Q2TV84 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm1Q2TV84 Gm5912-201ENSMUST00000122282 1438 ntBASIC21.24■□□□□ 0.99
Trpm1Q2TV84 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC21.24■□□□□ 0.99
Trpm1Q2TV84 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm1Q2TV84 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms