Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 AC125117.1-201ENSMUST00000228121 468 ntBASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Ush2AQ2QI47 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm18584-201ENSMUST00000203098 964 ntBASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm45186-201ENSMUST00000206874 478 ntBASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm12928-201ENSMUST00000117115 573 ntBASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm5953-201ENSMUST00000220644 2616 ntBASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm6257-201ENSMUST00000163864 910 ntBASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gm20426-201ENSMUST00000173657 440 ntBASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ush2AQ2QI47 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Gm8597-201ENSMUST00000191525 1109 ntBASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Gm24990-201ENSMUST00000157406 323 ntBASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Gm6627-201ENSMUST00000218299 2386 ntBASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Gm7286-201ENSMUST00000182691 1007 ntBASIC7.95□□□□□ -1.14
Ush2AQ2QI47 AC155258.1-201ENSMUST00000219303 253 ntBASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Gm6015-201ENSMUST00000217493 1586 ntBASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Gm42690-201ENSMUST00000197921 1836 ntBASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ush2AQ2QI47 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm27331-201ENSMUST00000183705 60 ntBASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm29649-201ENSMUST00000185649 419 ntBASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms