Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.5□□□□□ -0.25
Rab42Q0PD08 Gm9013-201ENSMUST00000132939 882 ntBASIC13.5□□□□□ -0.25
Rab42Q0PD08 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.5□□□□□ -0.25
Rab42Q0PD08 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.5□□□□□ -0.25
Rab42Q0PD08 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab42Q0PD08 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.49□□□□□ -0.25
Rab42Q0PD08 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.49□□□□□ -0.25
Rab42Q0PD08 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.49□□□□□ -0.25
Rab42Q0PD08 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.49□□□□□ -0.25
Rab42Q0PD08 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab42Q0PD08 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Matn2-206ENSMUST00000228570 2798 ntBASIC13.48□□□□□ -0.25
Rab42Q0PD08 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rab42Q0PD08 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rab42Q0PD08 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rab42Q0PD08 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms