Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm42627-201ENSMUST00000197347 224 ntBASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm43058-201ENSMUST00000197645 625 ntBASIC13.5□□□□□ -0.25
Chd8Q09XV5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.5□□□□□ -0.25
Chd8Q09XV5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm4909-201ENSMUST00000118749 794 ntBASIC13.5□□□□□ -0.25
Chd8Q09XV5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm8463-201ENSMUST00000208573 613 ntBASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm40466-201ENSMUST00000212174 422 ntBASIC13.5□□□□□ -0.25
Chd8Q09XV5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chd8Q09XV5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Mir1894-201ENSMUST00000122802 81 ntBASIC13.49□□□□□ -0.25
Chd8Q09XV5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm6407-201ENSMUST00000176468 549 ntBASIC13.49□□□□□ -0.25
Chd8Q09XV5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm37835-201ENSMUST00000193305 361 ntBASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm38341-201ENSMUST00000195357 515 ntBASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chd8Q09XV5 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.49□□□□□ -0.25
Chd8Q09XV5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd8Q09XV5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.48□□□□□ -0.25
Chd8Q09XV5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Gm7467-201ENSMUST00000185173 652 ntBASIC13.48□□□□□ -0.25
Chd8Q09XV5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.48□□□□□ -0.25
Chd8Q09XV5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.48□□□□□ -0.25
Chd8Q09XV5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.48□□□□□ -0.25
Chd8Q09XV5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chd8Q09XV5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.47□□□□□ -0.25
Chd8Q09XV5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Gm13813-201ENSMUST00000120998 787 ntBASIC13.47□□□□□ -0.25
Chd8Q09XV5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.47□□□□□ -0.25
Chd8Q09XV5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms