Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hspg2Q05793 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm44344-201ENSMUST00000200287 129 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm11918-201ENSMUST00000121660 179 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm18018-201ENSMUST00000198273 408 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm3786-201ENSMUST00000202659 378 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.06□□□□□ -0.64
Hspg2Q05793 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.06□□□□□ -0.64
Hspg2Q05793 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hspg2Q05793 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm15198-201ENSMUST00000117283 177 ntBASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.05□□□□□ -0.64
Hspg2Q05793 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Dancr-204ENSMUST00000132389 2347 ntBASIC11.05□□□□□ -0.64
Hspg2Q05793 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hspg2Q05793 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Gm8969-201ENSMUST00000199694 526 ntBASIC11.05□□□□□ -0.64
Hspg2Q05793 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hspg2Q05793 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.04□□□□□ -0.64
Hspg2Q05793 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.04□□□□□ -0.64
Hspg2Q05793 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hspg2Q05793 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.04□□□□□ -0.64
Hspg2Q05793 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.04□□□□□ -0.64
Hspg2Q05793 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hspg2Q05793 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms