Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Thumpd3P97770 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Thumpd3P97770 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thumpd3P97770 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.49■□□□□ 0.07
Thumpd3P97770 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.49■□□□□ 0.07
Thumpd3P97770 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.49■□□□□ 0.07
Thumpd3P97770 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.49■□□□□ 0.07
Thumpd3P97770 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thumpd3P97770 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.48■□□□□ 0.07
Thumpd3P97770 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.48■□□□□ 0.07
Thumpd3P97770 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.48■□□□□ 0.07
Thumpd3P97770 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Thumpd3P97770 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Thumpd3P97770 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.47■□□□□ 0.07
Thumpd3P97770 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.47■□□□□ 0.07
Thumpd3P97770 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Thumpd3P97770 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Thumpd3P97770 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Thumpd3P97770 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Thumpd3P97770 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Thumpd3P97770 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Thumpd3P97770 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Thumpd3P97770 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.46■□□□□ 0.07
Thumpd3P97770 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Thumpd3P97770 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Thumpd3P97770 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Thumpd3P97770 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.46■□□□□ 0.07
Thumpd3P97770 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms