Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nkx3-2P97503 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx3-2P97503 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.38□□□□□ -0.11
Nkx3-2P97503 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.38□□□□□ -0.11
Nkx3-2P97503 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Gm27300-201ENSMUST00000184085 97 ntBASIC14.38□□□□□ -0.11
Nkx3-2P97503 Gm27335-201ENSMUST00000184758 97 ntBASIC14.38□□□□□ -0.11
Nkx3-2P97503 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.38□□□□□ -0.11
Nkx3-2P97503 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkx3-2P97503 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.37□□□□□ -0.11
Nkx3-2P97503 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Gm14722-201ENSMUST00000118943 689 ntBASIC14.37□□□□□ -0.11
Nkx3-2P97503 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.37□□□□□ -0.11
Nkx3-2P97503 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx3-2P97503 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.37□□□□□ -0.11
Nkx3-2P97503 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx3-2P97503 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Gm6736-201ENSMUST00000166583 948 ntBASIC14.36□□□□□ -0.11
Nkx3-2P97503 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.36□□□□□ -0.11
Nkx3-2P97503 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx3-2P97503 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms