Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim43bP86448 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim43bP86448 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.66■□□□□ 0.1
Trim43bP86448 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim43bP86448 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim43bP86448 Gm18195-201ENSMUST00000207604 706 ntBASIC15.66■□□□□ 0.1
Trim43bP86448 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.66■□□□□ 0.1
Trim43bP86448 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim43bP86448 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.66■□□□□ 0.1
Trim43bP86448 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim43bP86448 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim43bP86448 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim43bP86448 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim43bP86448 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43bP86448 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim43bP86448 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim43bP86448 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim43bP86448 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Trim43bP86448 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim43bP86448 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim43bP86448 Gm6257-201ENSMUST00000163864 910 ntBASIC15.65■□□□□ 0.1
Trim43bP86448 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.65■□□□□ 0.1
Trim43bP86448 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.65■□□□□ 0.1
Trim43bP86448 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim43bP86448 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim43bP86448 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.65■□□□□ 0.1
Trim43bP86448 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim43bP86448 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Rps4l-201ENSMUST00000071745 943 ntBASIC15.65■□□□□ 0.1
Trim43bP86448 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim43bP86448 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trim43bP86448 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim43bP86448 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim43bP86448 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim43bP86448 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Gm12134-201ENSMUST00000122109 520 ntBASIC15.64■□□□□ 0.09
Trim43bP86448 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim43bP86448 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim43bP86448 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim43bP86448 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.64■□□□□ 0.09
Trim43bP86448 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trim43bP86448 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim43bP86448 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.64■□□□□ 0.09
Trim43bP86448 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim43bP86448 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim43bP86448 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim43bP86448 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim43bP86448 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim43bP86448 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim43bP86448 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trim43bP86448 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim43bP86448 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43bP86448 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms