Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.56□□□□□ -0.24
SgcbP82349 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
SgcbP82349 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SgcbP82349 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SgcbP82349 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.55□□□□□ -0.24
SgcbP82349 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SgcbP82349 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SgcbP82349 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.55□□□□□ -0.24
SgcbP82349 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
SgcbP82349 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SgcbP82349 Gm10499-201ENSMUST00000174094 934 ntBASIC13.55□□□□□ -0.24
SgcbP82349 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SgcbP82349 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SgcbP82349 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.55□□□□□ -0.24
SgcbP82349 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SgcbP82349 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.55□□□□□ -0.24
SgcbP82349 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SgcbP82349 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SgcbP82349 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SgcbP82349 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SgcbP82349 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Gm8000-201ENSMUST00000188378 592 ntBASIC13.54□□□□□ -0.24
SgcbP82349 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.54□□□□□ -0.24
SgcbP82349 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.54□□□□□ -0.24
SgcbP82349 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
SgcbP82349 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SgcbP82349 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SgcbP82349 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
SgcbP82349 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.53□□□□□ -0.24
SgcbP82349 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SgcbP82349 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms