Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Gm25990-201ENSMUST00000102440 86 ntBASIC15.65■□□□□ 0.1
Msx3P70354 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.65■□□□□ 0.1
Msx3P70354 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Gm6089-201ENSMUST00000197666 938 ntBASIC15.65■□□□□ 0.1
Msx3P70354 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.65■□□□□ 0.1
Msx3P70354 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.65■□□□□ 0.1
Msx3P70354 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.65■□□□□ 0.1
Msx3P70354 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Msx3P70354 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Msx3P70354 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Msx3P70354 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
Msx3P70354 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Msx3P70354 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.64■□□□□ 0.09
Msx3P70354 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Msx3P70354 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Msx3P70354 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.64■□□□□ 0.09
Msx3P70354 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Msx3P70354 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.64■□□□□ 0.09
Msx3P70354 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.64■□□□□ 0.09
Msx3P70354 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.64■□□□□ 0.09
Msx3P70354 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.64■□□□□ 0.09
Msx3P70354 Celf4-206ENSMUST00000224553 1729 ntBASIC15.64■□□□□ 0.09
Msx3P70354 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Msx3P70354 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.64■□□□□ 0.09
Msx3P70354 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.64■□□□□ 0.09
Msx3P70354 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Msx3P70354 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.63■□□□□ 0.09
Msx3P70354 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.63■□□□□ 0.09
Msx3P70354 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.63■□□□□ 0.09
Msx3P70354 Gm37153-201ENSMUST00000193637 231 ntBASIC15.63■□□□□ 0.09
Msx3P70354 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.63■□□□□ 0.09
Msx3P70354 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Rps4l-201ENSMUST00000071745 943 ntBASIC15.63■□□□□ 0.09
Msx3P70354 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Msx3P70354 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.63■□□□□ 0.09
Msx3P70354 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msx3P70354 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Msx3P70354 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Msx3P70354 Gm7222-201ENSMUST00000117512 906 ntBASIC15.62■□□□□ 0.09
Msx3P70354 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.62■□□□□ 0.09
Msx3P70354 Gm10499-201ENSMUST00000174094 934 ntBASIC15.62■□□□□ 0.09
Msx3P70354 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.62■□□□□ 0.09
Msx3P70354 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msx3P70354 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.62■□□□□ 0.09
Msx3P70354 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms